Overview: Using the widget with local dataSource:
The main goal of this R package is to enable configuring Vitessce visualizations using R syntax.
Our effort to develop converters for R formats remains ongoing. However, we provide a guide for R developers to write data conversion functions to support any type of R single-cell data structure (or to improve conversion for already-supported data structures).
The following vignettes in the "Examples with Local Data" section demonstrate how the dataset wrapper classes can be used with single-cell datasets stored on your local machine.
Due to a lack of native R support for Zarr, the R dataset conversion functions currently depend on a Python environment.
Subscribe to the Zarr in R issue for future updates about native Zarr support that would avoid the need for the Python environment.